version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 7 31.56 0 6632..9118 + 828 150014899 - Cbei_0007 - DNA gyrase subunit A 8 23.84 -2 14767..15282 + 171 150014900 - Cbei_0008 - putative metal dependent phosphohydrolase 9 28.16 0 15297..15818 + 173 150014901 - Cbei_0009 - 3H domain-containing protein 10 28.28 0 15821..17206 + 461 150014902 - Cbei_0010 - FAD dependent oxidoreductase 11 28.51 0 17223..17450 + 75 150014903 - Cbei_0011 - hypothetical protein 12 26.74 -1 18350..18865 + 171 150014904 - Cbei_0012 - GCN5-related N-acetyltransferase 13 27.04 -1 18862..22341 + 1159 150014905 - Cbei_0013 - ATP-dependent nuclease subunit AddB 14 28.68 0 22434..26171 + 1245 150014906 - Cbei_0014 - recombination helicase AddA 15 27.16 -1 26242..27423 - 393 150014907 - Cbei_0015 - ErfK/YbiS/YcfS/YnhG family protein 16 23.40 -2 27639..28121 + 160 150014908 - Cbei_0016 - hypothetical protein 17 25.74 -1 28292..29239 + 315 150014909 - Cbei_0017 - histidine kinase 18 26.82 -1 29536..30426 - 296 150014910 - Cbei_0018 - phosphatidylserine decarboxylase 19 27.01 -1 30808..31392 + 194 150014911 - Cbei_0019 - TetR family transcriptional regulator 20 27.76 0 31554..32342 + 262 150014912 - Cbei_0020 - HAD family hydrolase 21 31.27 0 32490..34085 - 531 150014913 - Cbei_0021 - ABC transporter related 22 24.92 -1 34318..34911 - 197 150014914 - Cbei_0022 - hypothetical protein 23 30.09 0 35133..35780 + 215 150014915 - Cbei_0023 - hemolysin III family channel protein 24 32.59 0 36010..36813 + 267 150014916 - Cbei_0024 - gamma-glutamyl kinase 25 33.49 0 36839..38083 + 414 150014917 - Cbei_0025 - gamma-glutamyl phosphate reductase 26 33.06 0 38358..38717 + 119 150014918 - Cbei_0026 - methylglyoxal synthase 27 30.51 0 38976..39755 + 259 150014919 - Cbei_0027 - short-chain dehydrogenase/reductase SDR 28 32.95 0 40396..41445 + 349 150014920 - Cbei_0028 - carbamoyl phosphate synthase small subunit 29 32.46 0 41460..44669 + 1069 150014921 carB Cbei_0029 - carbamoyl phosphate synthase large subunit 30 26.07 -1 44864..45097 + 77 150014922 - Cbei_0030 - hypothetical protein 31 29.37 0 45219..46328 - 369 150014923 - Cbei_0031 - metal dependent phosphohydrolase 32 30.64 0 46730..47584 + 284 150014924 - Cbei_0032 - glutamate racemase 33 35.43 +1 47690..48214 + 174 150014925 - Cbei_0033 - peptidylprolyl isomerase 34 27.42 0 48267..48638 + 123 150014926 - Cbei_0034 - hypothetical protein 35 30.64 0 48640..49308 + 222 150014927 - Cbei_0035 - helix-turn-helix domain-containing protein 36 34.21 +1 49461..52646 + 1061 150014928 - Cbei_0036 - peptidoglycan binding domain-containing protein 37 27.66 0 52779..53747 - 322 150014929 - Cbei_0037 - radical SAM domain-containing protein 38 28.97 0 53805..54881 - 358 150014930 - Cbei_0038 - hypothetical protein 39 33.01 0 55000..55929 + 309 150014931 - Cbei_0039 - putative radical SAM protein 40 28.73 0 55970..56686 + 238 150014932 - Cbei_0040 - 2-phosphosulfolactate phosphatase 41 32.42 0 56788..57006 - 72 150014933 - Cbei_0041 - BFD/(2Fe-2S)-binding domain-containing protein 42 28.80 0 57280..57963 + 227 150014934 - Cbei_0042 - two component transcriptional regulator 43 27.93 0 57967..59316 + 449 150014935 - Cbei_0043 - integral membrane sensor signal transduction histidine kinase 44 28.96 0 59470..59835 - 121 150014936 - Cbei_0044 - hypothetical protein 45 35.64 +1 59841..60143 - 100 150014937 - Cbei_0045 - hypothetical protein 46 31.92 0 60737..63850 + 1037 150014938 ileS Cbei_0046 - isoleucyl-tRNA synthetase 47 30.63 0 64112..65110 + 332 150014939 - Cbei_0047 - alanine racemase 48 30.41 0 65349..65792 + 147 150014940 - Cbei_0048 - transcriptional regulator, TrmB 49 32.68 0 65785..67158 + 457 150014941 - Cbei_0049 - MATE efflux family protein 50 27.96 0 67214..67399 - 61 150014942 - Cbei_0050 - hypothetical protein 51 32.81 0 67512..68087 + 191 150014943 - Cbei_0051 - nucleoside recognition domain-containing protein 52 29.69 0 68141..68662 + 173 150014944 - Cbei_0052 - nucleoside recognition domain-containing protein 53 29.08 0 68779..70023 + 414 150014945 - Cbei_0053 - peptidase M24 54 30.52 0 70131..71906 + 591 150014946 - Cbei_0054 - peptidase M24 55 31.48 0 72579..74516 + 645 150014947 - Cbei_0055 - methionyl-tRNA synthetase 56 29.52 0 74848..75660 + 270 150014948 - Cbei_0056 - TatD family hydrolase 57 36.94 +1 75956..77008 + 350 150014949 - Cbei_0057 - 3D domain-containing protein 58 32.62 0 77171..77728 + 185 150014950 - Cbei_0058 - primase/topoisomerase like protein 59 30.14 0 77729..78574 + 281 150014951 ksgA Cbei_0059 - dimethyladenosine transferase 60 30.60 0 78744..80903 + 719 150014952 - Cbei_0060 - hypothetical protein 61 27.05 -1 80915..81487 + 190 150014953 - Cbei_0061 - hypothetical protein 62 32.68 0 81707..82477 + 256 150014954 - Cbei_0062 - prolipoprotein diacylglyceryl transferase 63 28.20 0 82467..83303 + 278 150014955 - Cbei_0063 - hypothetical protein 64 34.29 +1 83322..84161 + 279 150014956 - Cbei_0064 - Mrp/NBP35 ATP-binding family protein 65 36.98 +1 84291..84482 + 63 150014957 - Cbei_0065 - ferredoxin 66 33.04 0 84713..85390 - 225 150014958 - Cbei_0066 - putative proton-coupled thiamine transporter YuaJ 67 32.16 0 85951..86799 - 282 150014959 - Cbei_0067 - degV family protein 68 31.39 0 87260..89368 + 702 150014960 - Cbei_0068 - anaerobic ribonucleoside triphosphate reductase 69 33.08 0 89973..91142 + 389 150014961 aksA Cbei_0069 - trans-homoaconitate synthase 70 34.84 +1 91157..93079 + 640 150014962 - Cbei_0070 - aconitate hydratase 71 29.61 0 93285..93794 + 169 150014963 - Cbei_0071 - anaerobic ribonucleoside-triphosphate reductase activating protein 72 29.08 0 93960..94571 + 203 150014964 - Cbei_0072 - DNA-3-methyladenine glycosylase 73 32.19 0 94951..95916 - 321 150014965 - Cbei_0073 - glycosyl transferase family protein 74 29.47 0 95992..97077 - 361 150014966 - Cbei_0074 - metal dependent phosphohydrolase 75 33.52 0 97459..98541 + 360 150014967 - Cbei_0075 - phosphoserine aminotransferase 76 32.26 0 99045..100439 - 464 150014968 asnC Cbei_0076 - asparaginyl-tRNA synthetase 77 30.47 0 100772..101470 - 232 150014969 - Cbei_0077 - metallophosphoesterase 78 32.10 0 101507..102886 - 459 150014970 murC Cbei_0078 - UDP-N-acetylmuramate--L-alanine ligase 79 31.86 0 103174..103989 + 271 150014971 - Cbei_0079 - purine operon repressor 80 31.52 0 104320..104595 + 91 150014972 - Cbei_0080 - SpoVG family protein 81 31.58 0 104791..106158 + 455 150014973 - Cbei_0081 - UDP-N-acetylglucosamine pyrophosphorylase 82 34.27 +1 106206..107171 + 321 150014974 - Cbei_0082 - ribose-phosphate pyrophosphokinase 83 30.28 0 107490..108176 + 228 150014975 - Cbei_0083 - two component transcriptional regulator 84 28.27 0 108177..109598 + 473 150014976 - Cbei_0084 - integral membrane sensor signal transduction histidine kinase 85 31.60 0 109621..110196 + 191 150014977 - Cbei_0085 - peptidyl-tRNA hydrolase 86 31.05 0 110211..113711 + 1166 150014978 - Cbei_0086 - transcription-repair coupling factor 87 31.22 0 113945..115033 + 362 150014979 prsA Cbei_0087 - peptidylprolyl isomerase 88 33.33 0 115288..115836 + 182 150014980 - Cbei_0088 - AbrB family transcriptional regulator 89 29.88 0 115932..117467 + 511 150014981 - Cbei_0089 - polysaccharide biosynthesis protein 90 30.17 0 117485..118936 + 483 150014982 - Cbei_0090 - MazG family protein 91 31.52 0 119157..119432 + 91 150014983 - Cbei_0091 - histone family protein DNA-binding protein 92 32.18 0 119503..119763 + 86 150014984 - Cbei_0092 - RNA-binding S4 domain-containing protein 93 28.57 0 119967..120260 + 97 150014985 - Cbei_0093 - YabP family protein 94 22.39 -2 120270..120662 + 130 150014986 - Cbei_0094 - spore cortex biosynthesis protein YabQ 95 28.12 0 120740..121027 + 95 150014987 - Cbei_0095 - septum formation initiator 96 32.60 0 121177..121587 + 136 150014988 - Cbei_0096 - hypothetical protein 97 30.64 0 123521..125932 + 803 150014989 - Cbei_0097 - sporulation stage II, protein E 98 27.36 -1 126199..127605 + 468 150014990 - Cbei_0098 - tRNA(Ile)-lysidine synthetase 99 28.52 0 127608..128147 + 179 150014991 - Cbei_0099 - hypoxanthine phosphoribosyltransferase 100 35.10 +1 128222..130030 + 602 150014992 - Cbei_0100 - ATP-dependent metalloprotease FtsH 101 34.11 +1 130234..131904 + 556 150014993 - Cbei_0101 - formate--tetrahydrofolate ligase 102 30.09 0 132096..132896 + 266 150014994 - Cbei_0102 - pantothenate kinase 103 33.54 0 132946..133911 + 321 150014995 - Cbei_0103 - nifR3 family TIM-barrel protein 104 30.43 0 134393..134875 + 160 150014996 - Cbei_0104 - transcription elongation factor GreA 105 32.93 0 134890..136395 + 501 150014997 lysS Cbei_0105 - lysyl-tRNA synthetase 106 32.76 0 137905..139296 + 463 150014998 - Cbei_0106 - glycyl-tRNA synthetase 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.